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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK06936.1Protein of unknown function. (145 aa)    
Predicted Functional Partners:
SDK06816.1
Protein of unknown function.
       0.580
SDK06869.1
Transglutaminase-like superfamily protein.
       0.580
SDK06908.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
       0.580
SDI80735.1
Hypothetical protein.
  
     0.556
SDK06969.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
       0.549
SDJ70780.1
Protein of unknown function.
  
     0.480
SDK07821.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.480
SDJ07327.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.475
SDJ57260.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.475
SDI65743.1
Hypothetical protein.
  
     0.471
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.