STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yghOHypothetical protein. (372 aa)    
Predicted Functional Partners:
SDK07654.1
Putative MetA-pathway of phenol degradation.
 
     0.815
SDJ45055.1
Hypothetical protein.
  
     0.691
SDK07694.1
Protein of unknown function.
       0.590
SDI54565.1
Protein of unknown function.
  
     0.571
SDJ91990.1
Hypothetical protein.
  
     0.505
SDJ00981.1
Hypothetical protein.
  
     0.499
SDI58279.1
Hypothetical protein.
  
     0.495
SDK07733.1
Membrane protein YfhO.
       0.488
SDI66427.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.485
SDJ51280.1
Aspartyl protease.
  
    0.466
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.