STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK08140.1Two component transcriptional regulator, LytTR family. (254 aa)    
Predicted Functional Partners:
SDK08190.1
Histidine kinase.
 
  0.967
SDI62301.1
Histidine kinase.
  
  0.860
SDI66477.1
Histidine kinase.
  
  0.860
SDI88984.1
Histidine kinase.
  
  0.859
SDJ90590.1
Histidine kinase.
  
  0.858
SDI95224.1
Two component transcriptional regulator, LytTR family.
  
  
  0.758
SDI57117.1
Two component regulator propeller.
    
 0.579
SDI61110.1
Signal transduction histidine kinase.
  
  
  0.534
SDJ29487.1
Two component regulator propeller.
    
  0.472
SDK08231.1
Hypothetical protein.
       0.470
Your Current Organism:
Flavobacterium glycines
NCBI taxonomy Id: 551990
Other names: F. glycines, Flavobacterium glycines Madhaiyan et al. 2010, Flavobacterium sp. Gm-149, ICMP 17618, NBRC 105008, strain Gm-149
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.