STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ74617.1Putative peptidoglycan binding domain-containing protein. (238 aa)    
Predicted Functional Partners:
SDZ74637.1
His-Xaa-Ser system radical SAM maturase HxsB.
 
     0.824
SDZ74628.1
His-Xaa-Ser system protein HxsD.
       0.793
SDZ74650.1
His-Xaa-Ser system radical SAM maturase HxsC.
       0.758
SDZ87061.1
Exopolysaccharide biosynthesis protein.
  
  
  0.737
SEA10462.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.563
SEA66961.1
Beta-lactamase enzyme family protein.
  
 
 0.518
SDZ91616.1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
    
 0.505
SEA06309.1
Por secretion system C-terminal sorting domain-containing protein.
    
  0.487
SDZ87958.1
AraC family transcriptional regulator.
  
     0.483
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.483
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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