Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ83929.1 | SDZ83940.1 | SAMN05192529_102258 | SAMN05192529_102259 | MFS transporter, UMF1 family. | Methyltransferase domain-containing protein. | 0.496 |
SDZ83929.1 | dnaX | SAMN05192529_102258 | SAMN05192529_102256 | MFS transporter, UMF1 family. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.644 |
SDZ83929.1 | tdk | SAMN05192529_102258 | SAMN05192529_11681 | MFS transporter, UMF1 family. | Thymidine kinase. | 0.518 |
SDZ83929.1 | uppP | SAMN05192529_102258 | SAMN05192529_102257 | MFS transporter, UMF1 family. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.740 |
SDZ83940.1 | SDZ83929.1 | SAMN05192529_102259 | SAMN05192529_102258 | Methyltransferase domain-containing protein. | MFS transporter, UMF1 family. | 0.496 |
SDZ83940.1 | uppP | SAMN05192529_102259 | SAMN05192529_102257 | Methyltransferase domain-containing protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.469 |
dnaX | SDZ83929.1 | SAMN05192529_102256 | SAMN05192529_102258 | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | MFS transporter, UMF1 family. | 0.644 |
dnaX | uppP | SAMN05192529_102256 | SAMN05192529_102257 | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.620 |
tdk | SDZ83929.1 | SAMN05192529_11681 | SAMN05192529_102258 | Thymidine kinase. | MFS transporter, UMF1 family. | 0.518 |
uppP | SDZ83929.1 | SAMN05192529_102257 | SAMN05192529_102258 | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | MFS transporter, UMF1 family. | 0.740 |
uppP | SDZ83940.1 | SAMN05192529_102257 | SAMN05192529_102259 | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | Methyltransferase domain-containing protein. | 0.469 |
uppP | dnaX | SAMN05192529_102257 | SAMN05192529_102256 | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.620 |