STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ81202.1Protein of unknown function. (311 aa)    
Predicted Functional Partners:
SEA10500.1
OstA-like protein.
  
     0.667
SEA52453.1
Hypothetical protein.
  
     0.628
lspA
Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
     0.609
SEA19929.1
His Kinase A (phospho-acceptor) domain-containing protein.
  
     0.574
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.563
SEA65174.1
Hypothetical protein.
  
     0.562
SDZ75728.1
Protein of unknown function.
  
     0.550
SEA58742.1
Ig-like domain-containing protein.
  
     0.535
SEA09717.1
Protein of unknown function.
  
     0.514
SEA24323.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.506
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.