STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ88681.1Protein of unknown function. (206 aa)    
Predicted Functional Partners:
SEA62875.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.946
SEA63532.1
Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.946
SEA62953.1
Protein of unknown function.
  
     0.716
SEA10500.1
OstA-like protein.
  
     0.568
SDZ96002.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.530
SDZ87301.1
Outer membrane protein.
  
  0.529
SDZ91262.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.516
SDZ77414.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.514
SDZ77429.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.508
SDZ87610.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
  0.508
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.