STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ87061.1Exopolysaccharide biosynthesis protein. (285 aa)    
Predicted Functional Partners:
SDZ73480.1
Ankyrin repeat-containing protein.
   
 0.903
SEA06485.1
Ankyrin repeat.
   
 0.903
SDZ87139.1
Helix-turn-helix domain-containing protein.
    
 0.814
SEA18678.1
Signal transduction histidine kinase.
  
 
 0.785
SEA16502.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
 0.756
SDZ74617.1
Putative peptidoglycan binding domain-containing protein.
  
  
  0.737
SEA10462.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.715
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
 0.672
SDZ73432.1
Signal transduction histidine kinase.
    
 0.615
SEA07092.1
Signal transduction histidine kinase.
    
 0.615
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.