Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ87286.1 | SDZ87301.1 | SAMN05192529_10380 | SAMN05192529_10381 | TIGR02757 family protein. | Outer membrane protein. | 0.529 |
SDZ87286.1 | SDZ91213.1 | SAMN05192529_10380 | SAMN05192529_10434 | TIGR02757 family protein. | Chemotaxis protein MotB. | 0.493 |
SDZ87286.1 | SEA16679.1 | SAMN05192529_10380 | SAMN05192529_109138 | TIGR02757 family protein. | Endonuclease-8. | 0.542 |
SDZ87286.1 | SEA19294.1 | SAMN05192529_10380 | SAMN05192529_11052 | TIGR02757 family protein. | DNA polymerase (family 10). | 0.446 |
SDZ87286.1 | SEA42402.1 | SAMN05192529_10380 | SAMN05192529_1189 | TIGR02757 family protein. | DNA-3-methyladenine glycosylase II. | 0.457 |
SDZ87286.1 | SEA43235.1 | SAMN05192529_10380 | SAMN05192529_11853 | TIGR02757 family protein. | A/G-specific DNA-adenine glycosylase. | 0.496 |
SDZ87286.1 | SEA61390.1 | SAMN05192529_10380 | SAMN05192529_13325 | TIGR02757 family protein. | Exodeoxyribonuclease-3. | 0.947 |
SDZ87286.1 | mutL | SAMN05192529_10380 | SAMN05192529_11966 | TIGR02757 family protein. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.511 |
SDZ87286.1 | polA | SAMN05192529_10380 | SAMN05192529_10387 | TIGR02757 family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.731 |
SDZ87286.1 | ung | SAMN05192529_10380 | SAMN05192529_13230 | TIGR02757 family protein. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.501 |
SDZ87301.1 | SDZ87286.1 | SAMN05192529_10381 | SAMN05192529_10380 | Outer membrane protein. | TIGR02757 family protein. | 0.529 |
SDZ91213.1 | SDZ87286.1 | SAMN05192529_10434 | SAMN05192529_10380 | Chemotaxis protein MotB. | TIGR02757 family protein. | 0.493 |
SEA16679.1 | SDZ87286.1 | SAMN05192529_109138 | SAMN05192529_10380 | Endonuclease-8. | TIGR02757 family protein. | 0.542 |
SEA16679.1 | SEA19294.1 | SAMN05192529_109138 | SAMN05192529_11052 | Endonuclease-8. | DNA polymerase (family 10). | 0.445 |
SEA16679.1 | SEA43235.1 | SAMN05192529_109138 | SAMN05192529_11853 | Endonuclease-8. | A/G-specific DNA-adenine glycosylase. | 0.428 |
SEA16679.1 | polA | SAMN05192529_109138 | SAMN05192529_10387 | Endonuclease-8. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.987 |
SEA19294.1 | SDZ87286.1 | SAMN05192529_11052 | SAMN05192529_10380 | DNA polymerase (family 10). | TIGR02757 family protein. | 0.446 |
SEA19294.1 | SEA16679.1 | SAMN05192529_11052 | SAMN05192529_109138 | DNA polymerase (family 10). | Endonuclease-8. | 0.445 |
SEA19294.1 | SEA43235.1 | SAMN05192529_11052 | SAMN05192529_11853 | DNA polymerase (family 10). | A/G-specific DNA-adenine glycosylase. | 0.410 |
SEA19294.1 | SEA61390.1 | SAMN05192529_11052 | SAMN05192529_13325 | DNA polymerase (family 10). | Exodeoxyribonuclease-3. | 0.929 |
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