Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ80231.1 | SDZ90760.1 | SAMN05192529_1025 | SAMN05192529_1047 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.465 |
SDZ90760.1 | SDZ80231.1 | SAMN05192529_1047 | SAMN05192529_1025 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.465 |
SDZ90760.1 | SDZ90780.1 | SAMN05192529_1047 | SAMN05192529_1048 | Iron complex outermembrane recepter protein. | Cytochrome c peroxidase. | 0.870 |
SDZ90760.1 | SDZ90796.1 | SAMN05192529_1047 | SAMN05192529_1049 | Iron complex outermembrane recepter protein. | Oxidoreductase molybdopterin binding domain-containing protein. | 0.673 |
SDZ90760.1 | SEA20937.1 | SAMN05192529_1047 | SAMN05192529_110129 | Iron complex outermembrane recepter protein. | Starch-binding associating with outer membrane. | 0.410 |
SDZ90760.1 | SEA28468.1 | SAMN05192529_1047 | SAMN05192529_112100 | Iron complex outermembrane recepter protein. | Outer membrane transport energization protein TonB. | 0.465 |
SDZ90760.1 | SEA28505.1 | SAMN05192529_1047 | SAMN05192529_112102 | Iron complex outermembrane recepter protein. | Outer membrane transport energization protein TonB. | 0.465 |
SDZ90760.1 | SEA34195.1 | SAMN05192529_1047 | SAMN05192529_11465 | Iron complex outermembrane recepter protein. | YD repeat-containing protein. | 0.465 |
SDZ90760.1 | infB | SAMN05192529_1047 | SAMN05192529_106154 | Iron complex outermembrane recepter protein. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.465 |
SDZ90780.1 | SDZ90760.1 | SAMN05192529_1048 | SAMN05192529_1047 | Cytochrome c peroxidase. | Iron complex outermembrane recepter protein. | 0.870 |
SDZ90780.1 | SDZ90796.1 | SAMN05192529_1048 | SAMN05192529_1049 | Cytochrome c peroxidase. | Oxidoreductase molybdopterin binding domain-containing protein. | 0.654 |
SDZ90796.1 | SDZ90760.1 | SAMN05192529_1049 | SAMN05192529_1047 | Oxidoreductase molybdopterin binding domain-containing protein. | Iron complex outermembrane recepter protein. | 0.673 |
SDZ90796.1 | SDZ90780.1 | SAMN05192529_1049 | SAMN05192529_1048 | Oxidoreductase molybdopterin binding domain-containing protein. | Cytochrome c peroxidase. | 0.654 |
SEA20937.1 | SDZ90760.1 | SAMN05192529_110129 | SAMN05192529_1047 | Starch-binding associating with outer membrane. | Iron complex outermembrane recepter protein. | 0.410 |
SEA28468.1 | SDZ90760.1 | SAMN05192529_112100 | SAMN05192529_1047 | Outer membrane transport energization protein TonB. | Iron complex outermembrane recepter protein. | 0.465 |
SEA28505.1 | SDZ90760.1 | SAMN05192529_112102 | SAMN05192529_1047 | Outer membrane transport energization protein TonB. | Iron complex outermembrane recepter protein. | 0.465 |
SEA34195.1 | SDZ90760.1 | SAMN05192529_11465 | SAMN05192529_1047 | YD repeat-containing protein. | Iron complex outermembrane recepter protein. | 0.465 |
infB | SDZ90760.1 | SAMN05192529_106154 | SAMN05192529_1047 | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Iron complex outermembrane recepter protein. | 0.465 |