Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ86838.1 | SDZ92174.1 | SAMN05192529_10350 | SAMN05192529_10487 | Phage shock protein PspC (stress-responsive transcriptional regulator). | Putative membrane protein. | 0.758 |
SDZ91653.1 | SDZ92174.1 | SAMN05192529_10459 | SAMN05192529_10487 | Phage shock protein PspC (stress-responsive transcriptional regulator). | Putative membrane protein. | 0.758 |
SDZ92174.1 | SDZ86838.1 | SAMN05192529_10487 | SAMN05192529_10350 | Putative membrane protein. | Phage shock protein PspC (stress-responsive transcriptional regulator). | 0.758 |
SDZ92174.1 | SDZ91653.1 | SAMN05192529_10487 | SAMN05192529_10459 | Putative membrane protein. | Phage shock protein PspC (stress-responsive transcriptional regulator). | 0.758 |
SDZ92174.1 | SDZ92188.1 | SAMN05192529_10487 | SAMN05192529_10488 | Putative membrane protein. | Predicted Zn-dependent peptidase. | 0.698 |
SDZ92174.1 | SDZ92206.1 | SAMN05192529_10487 | SAMN05192529_10489 | Putative membrane protein. | Predicted Zn-dependent peptidase. | 0.652 |
SDZ92174.1 | SEA25056.1 | SAMN05192529_10487 | SAMN05192529_111133 | Putative membrane protein. | Putative adhesin. | 0.401 |
SDZ92188.1 | SDZ92174.1 | SAMN05192529_10488 | SAMN05192529_10487 | Predicted Zn-dependent peptidase. | Putative membrane protein. | 0.698 |
SDZ92188.1 | SDZ92206.1 | SAMN05192529_10488 | SAMN05192529_10489 | Predicted Zn-dependent peptidase. | Predicted Zn-dependent peptidase. | 0.994 |
SDZ92206.1 | SDZ92174.1 | SAMN05192529_10489 | SAMN05192529_10487 | Predicted Zn-dependent peptidase. | Putative membrane protein. | 0.652 |
SDZ92206.1 | SDZ92188.1 | SAMN05192529_10489 | SAMN05192529_10488 | Predicted Zn-dependent peptidase. | Predicted Zn-dependent peptidase. | 0.994 |
SEA25056.1 | SDZ92174.1 | SAMN05192529_111133 | SAMN05192529_10487 | Putative adhesin. | Putative membrane protein. | 0.401 |