STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA18678.1Signal transduction histidine kinase. (759 aa)    
Predicted Functional Partners:
SDZ74404.1
PAS domain S-box-containing protein.
 
0.999
SDZ73432.1
Signal transduction histidine kinase.
 
0.999
SDZ87139.1
Helix-turn-helix domain-containing protein.
 0.999
SDZ95812.1
methylglutaconyl-CoA hydratase.
   
 0.999
SEA07092.1
Signal transduction histidine kinase.
 
0.999
SEA05555.1
Signal transduction histidine kinase.
 
0.999
SEA04731.1
Signal transduction histidine kinase.
 
0.999
SEA16502.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.999
SEA27652.1
Short chain enoyl-CoA hydratase.
   
 0.999
SEA27733.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.999
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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