STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA24811.1Protein of unknown function. (344 aa)    
Predicted Functional Partners:
SEA24833.1
Starch-binding associating with outer membrane.
 
  
 0.941
SEA24845.1
Iron complex outermembrane recepter protein.
 
     0.887
SEA24785.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
 
   
 0.861
SDZ91945.1
Hypothetical protein.
   
   0.840
SEA24751.1
Maltose/moltooligosaccharide transporter.
 
     0.739
SEA19030.1
Starch-binding associating with outer membrane.
  
  0.720
SEA48921.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
 
   
 0.715
SEA19013.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.701
SEA11224.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
     
 0.691
SDZ73456.1
Starch-binding associating with outer membrane.
  
  0.682
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.