STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA22957.1GLPGLI family protein. (1082 aa)    
Predicted Functional Partners:
SEA16502.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
 0.823
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.732
SDZ87139.1
Helix-turn-helix domain-containing protein.
    
 0.670
SEA26866.1
Hypothetical protein.
  
     0.669
SEA02545.1
Hypothetical protein.
  
   
 0.657
SEA18678.1
Signal transduction histidine kinase.
    
 0.649
SDZ73432.1
Signal transduction histidine kinase.
    
 0.643
SEA07092.1
Signal transduction histidine kinase.
    
 0.643
SEA05555.1
Signal transduction histidine kinase.
    
 0.643
SEA04731.1
Signal transduction histidine kinase.
    
 0.643
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.