Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEA23653.1 | SEA23671.1 | SAMN05192529_11155 | SAMN05192529_11156 | Heat shock protein Hsp15. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.558 |
SEA23671.1 | SEA23653.1 | SAMN05192529_11156 | SAMN05192529_11155 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Heat shock protein Hsp15. | 0.558 |
SEA23671.1 | SEA23699.1 | SAMN05192529_11156 | SAMN05192529_11157 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Hypothetical protein. | 0.564 |
SEA23671.1 | SEA57018.1 | SAMN05192529_11156 | SAMN05192529_12920 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.798 |
SEA23671.1 | SEA57874.1 | SAMN05192529_11156 | SAMN05192529_13013 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.509 |
SEA23671.1 | SEA57917.1 | SAMN05192529_11156 | SAMN05192529_13016 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Argininosuccinate synthase. | 0.627 |
SEA23671.1 | SEA61390.1 | SAMN05192529_11156 | SAMN05192529_13325 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Exodeoxyribonuclease-3. | 0.504 |
SEA23671.1 | argB | SAMN05192529_11156 | SAMN05192529_13012 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.533 |
SEA23671.1 | argC | SAMN05192529_11156 | SAMN05192529_13015 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.658 |
SEA23671.1 | nadE | SAMN05192529_11156 | SAMN05192529_101273 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.546 |
SEA23671.1 | pyrD | SAMN05192529_11156 | SAMN05192529_11960 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.565 |
SEA23699.1 | SEA23671.1 | SAMN05192529_11157 | SAMN05192529_11156 | Hypothetical protein. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.564 |
SEA57018.1 | SEA23671.1 | SAMN05192529_12920 | SAMN05192529_11156 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.798 |
SEA57018.1 | nadE | SAMN05192529_12920 | SAMN05192529_101273 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.760 |
SEA57874.1 | SEA23671.1 | SAMN05192529_13013 | SAMN05192529_11156 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.509 |
SEA57874.1 | SEA57917.1 | SAMN05192529_13013 | SAMN05192529_13016 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Argininosuccinate synthase. | 0.997 |
SEA57874.1 | argB | SAMN05192529_13013 | SAMN05192529_13012 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.998 |
SEA57874.1 | argC | SAMN05192529_13013 | SAMN05192529_13015 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.992 |
SEA57917.1 | SEA23671.1 | SAMN05192529_13016 | SAMN05192529_11156 | Argininosuccinate synthase. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.627 |
SEA57917.1 | SEA57874.1 | SAMN05192529_13016 | SAMN05192529_13013 | Argininosuccinate synthase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.997 |
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