STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA24081.1Predicted dehydrogenase. (331 aa)    
Predicted Functional Partners:
SDZ82718.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.926
SEA48582.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     0.745
SEA24064.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
       0.687
SEA22513.1
Predicted dehydrogenase.
  
  
  0.647
SDZ92807.1
Predicted dehydrogenase.
  
  
  0.634
SEA62250.1
Aminotransferase, LLPSF_NHT_00031 family; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.605
SEA10119.1
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
  
     0.539
SEA24046.1
Hypothetical protein.
       0.528
SEA65944.1
Predicted dehydrogenase.
  
  
  0.528
SEA24026.1
Hypothetical protein.
       0.521
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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