STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA33668.1Pimeloyl-ACP methyl ester carboxylesterase. (283 aa)    
Predicted Functional Partners:
SEA33658.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.876
SEA33635.1
Hypothetical protein.
       0.794
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.750
SEA11224.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.595
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.588
SEA41043.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
 0.570
SEA33691.1
Hypothetical protein.
       0.569
SEA27115.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
     
 0.566
SEA34673.1
Enoyl-[acyl-carrier-protein] reductase [NADH].
     
 0.566
SEA06485.1
Ankyrin repeat.
  
 
 0.504
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.