STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA33923.1Polysaccharide lyase. (257 aa)    
Predicted Functional Partners:
SEA33905.1
Glycosyltransferase involved in cell wall bisynthesis.
    
  0.468
SEA41377.1
Subtilase family protein.
   
 0.449
SDZ88486.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.444
SDZ87032.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.442
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.437
SDZ77886.1
Thioredoxin-like domain-containing protein.
    
   0.432
SEA49875.1
Hypothetical protein.
    
   0.432
SDZ93011.1
Putative collagen-binding domain of a collagenase.
    
  0.431
SEA22447.1
Protein of unknown function.
    
   0.431
SEA34030.1
Hypothetical protein.
    
   0.426
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.