STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA34030.1Hypothetical protein. (408 aa)    
Predicted Functional Partners:
SEA34064.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
  
 0.927
SDZ87032.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.923
SDZ93011.1
Putative collagen-binding domain of a collagenase.
   
 0.923
SEA33977.1
Capsular exopolysaccharide family.
    
 0.853
SEA34009.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
 
     0.838
SEA33991.1
Glycosyl transferases group 1.
 
     0.807
SEA33945.1
Undecaprenyl-phosphate glucose phosphotransferase.
    
 0.781
SEA62283.1
Capsular exopolysaccharide family.
    
 0.696
SEA24739.1
Enterochelin esterase.
    
   0.675
SDZ76674.1
Rhamnogalacturonan endolyase.
   
 0.637
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.