Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ95859.1 | SEA17238.1 | SAMN05192529_10531 | SAMN05192529_109166 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Dihydrolipoamide dehydrogenase. | 0.570 |
SDZ95859.1 | SEA20499.1 | SAMN05192529_10531 | SAMN05192529_110112 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thiol-disulfide isomerase or thioredoxin. | 0.629 |
SDZ95859.1 | SEA36847.1 | SAMN05192529_10531 | SAMN05192529_11564 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | Thiol-disulfide isomerase or thioredoxin. | 0.629 |
SDZ97763.1 | SEA20499.1 | SAMN05192529_105119 | SAMN05192529_110112 | Thiol:disulfide interchange protein DsbD. | Thiol-disulfide isomerase or thioredoxin. | 0.542 |
SDZ97763.1 | SEA36847.1 | SAMN05192529_105119 | SAMN05192529_11564 | Thiol:disulfide interchange protein DsbD. | Thiol-disulfide isomerase or thioredoxin. | 0.610 |
SDZ97763.1 | msrA | SAMN05192529_105119 | SAMN05192529_12125 | Thiol:disulfide interchange protein DsbD. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.643 |
SDZ97763.1 | msrA-2 | SAMN05192529_105119 | SAMN05192529_13214 | Thiol:disulfide interchange protein DsbD. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.643 |
SEA17238.1 | SDZ95859.1 | SAMN05192529_109166 | SAMN05192529_10531 | Dihydrolipoamide dehydrogenase. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.570 |
SEA17238.1 | SEA20499.1 | SAMN05192529_109166 | SAMN05192529_110112 | Dihydrolipoamide dehydrogenase. | Thiol-disulfide isomerase or thioredoxin. | 0.762 |
SEA17238.1 | SEA36847.1 | SAMN05192529_109166 | SAMN05192529_11564 | Dihydrolipoamide dehydrogenase. | Thiol-disulfide isomerase or thioredoxin. | 0.762 |
SEA17238.1 | SEA44315.1 | SAMN05192529_109166 | SAMN05192529_1195 | Dihydrolipoamide dehydrogenase. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.570 |
SEA20499.1 | SDZ95859.1 | SAMN05192529_110112 | SAMN05192529_10531 | Thiol-disulfide isomerase or thioredoxin. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C). | 0.629 |
SEA20499.1 | SDZ97763.1 | SAMN05192529_110112 | SAMN05192529_105119 | Thiol-disulfide isomerase or thioredoxin. | Thiol:disulfide interchange protein DsbD. | 0.542 |
SEA20499.1 | SEA17238.1 | SAMN05192529_110112 | SAMN05192529_109166 | Thiol-disulfide isomerase or thioredoxin. | Dihydrolipoamide dehydrogenase. | 0.762 |
SEA20499.1 | SEA31093.1 | SAMN05192529_110112 | SAMN05192529_11367 | Thiol-disulfide isomerase or thioredoxin. | Thiol:disulfide interchange protein DsbD. | 0.542 |
SEA20499.1 | SEA36847.1 | SAMN05192529_110112 | SAMN05192529_11564 | Thiol-disulfide isomerase or thioredoxin. | Thiol-disulfide isomerase or thioredoxin. | 0.641 |
SEA20499.1 | SEA41061.1 | SAMN05192529_110112 | SAMN05192529_11740 | Thiol-disulfide isomerase or thioredoxin. | Protein of unknown function. | 0.635 |
SEA20499.1 | SEA44315.1 | SAMN05192529_110112 | SAMN05192529_1195 | Thiol-disulfide isomerase or thioredoxin. | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin). | 0.629 |
SEA20499.1 | msrA | SAMN05192529_110112 | SAMN05192529_12125 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.647 |
SEA20499.1 | msrA-2 | SAMN05192529_110112 | SAMN05192529_13214 | Thiol-disulfide isomerase or thioredoxin. | Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.647 |
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