STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA45430.1Putative transposase. (105 aa)    
Predicted Functional Partners:
SEA15253.1
Transposase.
 
     0.758
SEA63733.1
Transposase.
 
     0.746
SEA65984.1
Transposase.
 
     0.746
SEA64890.1
Transposase.
 
     0.745
SEA41707.1
Transposase.
 
     0.736
SEA63117.1
Transposase.
 
     0.736
SEA13971.1
Transposase InsO and inactivated derivatives.
  
     0.691
SEA15378.1
Transposase InsO and inactivated derivatives.
  
     0.678
SEA63375.1
Transposase InsO and inactivated derivatives.
  
     0.442
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.