STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA51087.1Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (498 aa)    
Predicted Functional Partners:
SEA12420.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.701
SEA51757.1
L-proline dehydrogenase.
 
  
 0.692
SEA16502.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.552
SEA51112.1
ElaA protein.
       0.546
SEA51062.1
Predicted O-methyltransferase YrrM.
       0.529
SEA16122.1
BadF-type ATPase.
 
     0.524
SEA51045.1
Flagellum-specific peptidoglycan hydrolase FlgJ.
       0.519
SDZ88586.1
Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains.
  
     0.439
SDZ77613.1
Uncharacterized conserved protein YbbC, DUF1343 family.
     0.416
SEA18678.1
Signal transduction histidine kinase.
     
 0.405
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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