Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ77833.1 | SDZ77847.1 | SAMN05192529_101424 | SAMN05192529_101425 | TonB-linked outer membrane protein, SusC/RagA family. | SusD family protein. | 0.943 |
SDZ77833.1 | SEA00950.1 | SAMN05192529_101424 | SAMN05192529_10620 | TonB-linked outer membrane protein, SusC/RagA family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.557 |
SDZ77833.1 | SEA40701.1 | SAMN05192529_101424 | SAMN05192529_11720 | TonB-linked outer membrane protein, SusC/RagA family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.427 |
SDZ77833.1 | SEA49710.1 | SAMN05192529_101424 | SAMN05192529_12314 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.691 |
SDZ77833.1 | SEA54989.1 | SAMN05192529_101424 | SAMN05192529_12714 | TonB-linked outer membrane protein, SusC/RagA family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.605 |
SDZ77833.1 | SEA55010.1 | SAMN05192529_101424 | SAMN05192529_12715 | TonB-linked outer membrane protein, SusC/RagA family. | FecR protein. | 0.666 |
SDZ77833.1 | SEA66317.1 | SAMN05192529_101424 | SAMN05192529_14112 | TonB-linked outer membrane protein, SusC/RagA family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.501 |
SDZ77847.1 | SDZ77833.1 | SAMN05192529_101425 | SAMN05192529_101424 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.943 |
SDZ77847.1 | SEA00950.1 | SAMN05192529_101425 | SAMN05192529_10620 | SusD family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.563 |
SDZ77847.1 | SEA40701.1 | SAMN05192529_101425 | SAMN05192529_11720 | SusD family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.439 |
SDZ77847.1 | SEA49710.1 | SAMN05192529_101425 | SAMN05192529_12314 | SusD family protein. | Starch-binding associating with outer membrane. | 0.546 |
SDZ77847.1 | SEA54989.1 | SAMN05192529_101425 | SAMN05192529_12714 | SusD family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.673 |
SDZ77847.1 | SEA55010.1 | SAMN05192529_101425 | SAMN05192529_12715 | SusD family protein. | FecR protein. | 0.680 |
SDZ77847.1 | SEA55029.1 | SAMN05192529_101425 | SAMN05192529_12716 | SusD family protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.652 |
SDZ77847.1 | SEA66317.1 | SAMN05192529_101425 | SAMN05192529_14112 | SusD family protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.487 |
SEA00950.1 | SDZ77833.1 | SAMN05192529_10620 | SAMN05192529_101424 | RNA polymerase sigma-70 factor, ECF subfamily. | TonB-linked outer membrane protein, SusC/RagA family. | 0.557 |
SEA00950.1 | SDZ77847.1 | SAMN05192529_10620 | SAMN05192529_101425 | RNA polymerase sigma-70 factor, ECF subfamily. | SusD family protein. | 0.563 |
SEA00950.1 | SEA02244.1 | SAMN05192529_10620 | SAMN05192529_10686 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.746 |
SEA00950.1 | SEA49710.1 | SAMN05192529_10620 | SAMN05192529_12314 | RNA polymerase sigma-70 factor, ECF subfamily. | Starch-binding associating with outer membrane. | 0.427 |
SEA00950.1 | SEA54989.1 | SAMN05192529_10620 | SAMN05192529_12714 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.758 |
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