Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ81368.1 | SEA56399.1 | SAMN05192529_10285 | SAMN05192529_12839 | AraC-type DNA-binding protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.452 |
SDZ87422.1 | SEA35920.1 | SAMN05192529_10390 | SAMN05192529_11518 | Glutamate synthase (NADPH/NADH) large chain. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.447 |
SDZ87422.1 | SEA56399.1 | SAMN05192529_10390 | SAMN05192529_12839 | Glutamate synthase (NADPH/NADH) large chain. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.447 |
SDZ87422.1 | SEA56420.1 | SAMN05192529_10390 | SAMN05192529_12840 | Glutamate synthase (NADPH/NADH) large chain. | L-2,4-diaminobutyrate decarboxylase. | 0.928 |
SEA35920.1 | SDZ87422.1 | SAMN05192529_11518 | SAMN05192529_10390 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Glutamate synthase (NADPH/NADH) large chain. | 0.447 |
SEA35920.1 | SEA56399.1 | SAMN05192529_11518 | SAMN05192529_12839 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.674 |
SEA56386.1 | SEA56399.1 | SAMN05192529_12838 | SAMN05192529_12839 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.440 |
SEA56399.1 | SDZ81368.1 | SAMN05192529_12839 | SAMN05192529_10285 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | AraC-type DNA-binding protein. | 0.452 |
SEA56399.1 | SDZ87422.1 | SAMN05192529_12839 | SAMN05192529_10390 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Glutamate synthase (NADPH/NADH) large chain. | 0.447 |
SEA56399.1 | SEA35920.1 | SAMN05192529_12839 | SAMN05192529_11518 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.674 |
SEA56399.1 | SEA56386.1 | SAMN05192529_12839 | SAMN05192529_12838 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.440 |
SEA56399.1 | SEA56420.1 | SAMN05192529_12839 | SAMN05192529_12840 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | L-2,4-diaminobutyrate decarboxylase. | 0.607 |
SEA56420.1 | SDZ87422.1 | SAMN05192529_12840 | SAMN05192529_10390 | L-2,4-diaminobutyrate decarboxylase. | Glutamate synthase (NADPH/NADH) large chain. | 0.928 |
SEA56420.1 | SEA56399.1 | SAMN05192529_12840 | SAMN05192529_12839 | L-2,4-diaminobutyrate decarboxylase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.607 |