STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA59140.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
SEA59120.1
Hypothetical protein.
       0.757
SEA59105.1
Hypothetical protein.
       0.661
SEA59159.1
Hypothetical protein.
       0.634
SEA59050.1
Hypothetical protein.
       0.626
SEA59067.1
Phage head-tail joining protein.
       0.626
SEA59087.1
Hypothetical protein.
       0.626
SEA59019.1
Hypothetical protein.
       0.574
SEA59035.1
Hypothetical protein.
       0.574
SEA58969.1
Phage portal protein, HK97 family.
       0.435
SEA58985.1
Phage prohead protease, HK97 family.
       0.435
Your Current Organism:
Arachidicoccus rhizosphaerae
NCBI taxonomy Id: 551991
Other names: A. rhizosphaerae, Arachidicoccus rhizosphaerae Madhaiyan et al. 2015, Flavisolibacter sp. Vu-144, Flavisolibacter sp. Vu-35, Flavisolibacter sp. Vu-7, KCTC 22378, NCIMB 14473, strain Vu-144
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.