STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO03391.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
SEP03269.1
Starch-binding associating with outer membrane.
  
     0.693
SEM97218.1
Hypothetical protein.
  
     0.638
SEN40434.1
Amidohydrolase family protein.
  
     0.637
SEN17378.1
Protein of unknown function, DUF393.
  
     0.621
SEP03096.1
AraC-type DNA-binding protein.
  
     0.620
SEO03418.1
Iron complex outermembrane recepter protein.
 
     0.611
SEO99741.1
Uncharacterized conserved protein, DUF2252 family.
  
     0.603
SEP03290.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.578
SEN57069.1
Pectate lyase superfamily protein.
  
     0.568
SEM77803.1
Uncharacterized conserved protein, DUF2252 family.
  
     0.560
Your Current Organism:
Mucilaginibacter gossypiicola
NCBI taxonomy Id: 551995
Other names: KCTC 22379, M. gossypiicola, Mucilaginibacter gossypiicola Madhaiyan et al. 2010, NCIMB 14471, Pedobacter sp. Gh-48, strain Gh-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.