STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF63728.1SusE outer membrane protein. (378 aa)    
Predicted Functional Partners:
SDF63626.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.929
SDF63673.1
Starch-binding associating with outer membrane.
 
 
   0.921
SDF63777.1
Predicted alpha-1,6-mannanase, GH76 family.
 
     0.895
SDH63728.1
Predicted alpha-1,6-mannanase, GH76 family.
  
     0.691
SDF63819.1
Glycosyl hydrolase family 76.
 
     0.628
SDH88243.1
Protein of unknown function.
  
     0.607
SDH37820.1
Transcriptional regulator, GntR family.
 
     0.580
SDH06801.1
Starch-binding associating with outer membrane.
  
     0.573
SDH19256.1
Starch-binding associating with outer membrane.
 
 
   0.571
SDH88277.1
Starch-binding associating with outer membrane.
 
 
   0.571
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.