STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF64230.1RNA polymerase sigma-70 factor, ECF subfamily. (195 aa)    
Predicted Functional Partners:
SDH88620.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.754
SDI44589.1
Protein of unknown function.
  
   0.719
SDG16479.1
Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19.
  
   0.712
SDI01351.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.710
SDH54874.1
Protein of unknown function.
  
   0.708
SDF64123.1
Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19.
  
   0.707
SDH08153.1
Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19.
  
   0.707
SDG10037.1
Protein of unknown function.
  
   0.700
SDF63579.1
Protein of unknown function.
  
   0.699
SDG20631.1
Ferric-dicitrate binding protein FerR, regulates iron transport through sigma-19.
  
   0.697
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.