STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF73290.1Starch-binding associating with outer membrane. (479 aa)    
Predicted Functional Partners:
SDF73330.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.925
SDG69252.1
TonB-linked outer membrane protein, SusC/RagA family.
     0.754
SDF73260.1
Protein of unknown function.
       0.711
SDH86900.1
TonB-linked outer membrane protein, SusC/RagA family.
  
 
   0.647
SDG02396.1
TonB-linked outer membrane protein, SusC/RagA family.
     0.632
SDG61102.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.624
SDH86936.1
Starch-binding associating with outer membrane.
  
 
   0.587
SDG36562.1
Starch-binding associating with outer membrane.
  
 
   0.572
SDG60174.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
 
 0.570
SDH68116.1
Iron complex outermembrane recepter protein.
  
 
   0.567
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.