STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF74018.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
SDH67061.1
General stress protein 26.
   
    0.710
SDI57328.1
Hypothetical protein.
  
     0.625
SDG47191.1
Hypothetical protein.
  
     0.617
SDH61227.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
  
    0.601
SDI82117.1
Catechol 2,3-dioxygenase.
  
     0.586
SDG88192.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.582
SDI82239.1
Uncharacterized conserved protein.
  
     0.582
SDI50870.1
Hypothetical protein.
  
     0.577
SDG60012.1
Hypothetical protein.
  
     0.556
SDH02564.1
Cytosine/adenosine deaminase.
  
     0.551
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.