STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF75754.1Hypothetical protein. (327 aa)    
Predicted Functional Partners:
SDF75721.1
D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.
 
    0.813
SDG36165.1
Protein of unknown function.
  
     0.744
SDH02316.1
O-antigen ligase.
 
     0.644
SDH02280.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.583
SDI67648.1
Conserved hypothetical protein.
  
     0.556
SDH02143.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.549
SDI00497.1
AsmA protein.
  
     0.513
SDI82564.1
SnoaL-like domain-containing protein.
  
     0.460
SDH30449.1
Peptide chain release factor.
  
    0.451
SDH88846.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
 
     0.450
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.