node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDF64648.1 | SDF64694.1 | SAMN05192573_10132 | SAMN05192573_10133 | ATP-independent RNA helicase DbpA. | Protein of unknown function. | 0.789 |
SDF64648.1 | SDG06554.1 | SAMN05192573_10132 | SAMN05192573_102152 | ATP-independent RNA helicase DbpA. | SSU ribosomal protein S1P. | 0.740 |
SDF64648.1 | fusA | SAMN05192573_10132 | SAMN05192573_112206 | ATP-independent RNA helicase DbpA. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.863 |
SDF64648.1 | nnrE | SAMN05192573_10132 | SAMN05192573_11534 | ATP-independent RNA helicase DbpA. | NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...] | 0.852 |
SDF64648.1 | rplC | SAMN05192573_10132 | SAMN05192573_104140 | ATP-independent RNA helicase DbpA. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.771 |
SDF64648.1 | rplM | SAMN05192573_10132 | SAMN05192573_10470 | ATP-independent RNA helicase DbpA. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.741 |
SDF64648.1 | rplX | SAMN05192573_10132 | SAMN05192573_104151 | ATP-independent RNA helicase DbpA. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.745 |
SDF64648.1 | rpsD | SAMN05192573_10132 | SAMN05192573_104166 | ATP-independent RNA helicase DbpA. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.761 |
SDF64648.1 | rpsE | SAMN05192573_10132 | SAMN05192573_104157 | ATP-independent RNA helicase DbpA. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.731 |
SDF64648.1 | rpsK | SAMN05192573_10132 | SAMN05192573_104165 | ATP-independent RNA helicase DbpA. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.717 |
SDF64694.1 | SDF64648.1 | SAMN05192573_10133 | SAMN05192573_10132 | Protein of unknown function. | ATP-independent RNA helicase DbpA. | 0.789 |
SDG06554.1 | SDF64648.1 | SAMN05192573_102152 | SAMN05192573_10132 | SSU ribosomal protein S1P. | ATP-independent RNA helicase DbpA. | 0.740 |
SDG06554.1 | fusA | SAMN05192573_102152 | SAMN05192573_112206 | SSU ribosomal protein S1P. | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.930 |
SDG06554.1 | rplC | SAMN05192573_102152 | SAMN05192573_104140 | SSU ribosomal protein S1P. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.993 |
SDG06554.1 | rplM | SAMN05192573_102152 | SAMN05192573_10470 | SSU ribosomal protein S1P. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.990 |
SDG06554.1 | rplX | SAMN05192573_102152 | SAMN05192573_104151 | SSU ribosomal protein S1P. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.992 |
SDG06554.1 | rpsD | SAMN05192573_102152 | SAMN05192573_104166 | SSU ribosomal protein S1P. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.997 |
SDG06554.1 | rpsE | SAMN05192573_102152 | SAMN05192573_104157 | SSU ribosomal protein S1P. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.996 |
SDG06554.1 | rpsK | SAMN05192573_102152 | SAMN05192573_104165 | SSU ribosomal protein S1P. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.997 |
fusA | SDF64648.1 | SAMN05192573_112206 | SAMN05192573_10132 | Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | ATP-independent RNA helicase DbpA. | 0.863 |