STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF77788.12-keto-4-methylthiobutyrate aminotransferase apoenzyme. (381 aa)    
Predicted Functional Partners:
SDF77752.1
Predicted amidohydrolase.
 
  
 0.705
SDI34994.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.545
GltB
Glutamate synthase (NADH) large subunit.
  
  
 0.500
SDG89564.1
D-3-phosphoglycerate dehydrogenase.
  
 
 0.496
SDF77821.1
TIGR01666 family membrane protein.
  
    0.480
SDI72164.1
Aspartate kinase.
  
 
 0.480
SDG03755.1
Diaminopimelate decarboxylase.
 
  
 0.417
SDF77682.1
Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.404
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.