Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NuoF | SDF83422.1 | SAMN05192573_12619 | SAMN05192573_101500 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Zinc protease. | 0.841 |
NuoF | SDF87301.1 | SAMN05192573_12619 | SAMN05192573_101607 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.911 |
NuoF | SDG40962.1 | SAMN05192573_12619 | SAMN05192573_103326 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Cytochrome b6-f complex iron-sulfur subunit. | 0.911 |
NuoF | SDG57356.1 | SAMN05192573_12619 | SAMN05192573_10414 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.876 |
NuoF | SDG57398.1 | SAMN05192573_12619 | SAMN05192573_10415 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.915 |
NuoF | SDH14169.1 | SAMN05192573_12619 | SAMN05192573_10750 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Glycine/D-amino acid oxidase. | 0.911 |
NuoF | SDH86620.1 | SAMN05192573_12619 | SAMN05192573_11391 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.911 |
NuoF | SDI63937.1 | SAMN05192573_12619 | SAMN05192573_12618 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH dehydrogenase subunit E. | 0.999 |
NuoF | SDI64014.1 | SAMN05192573_12619 | SAMN05192573_12620 | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | NADH dehydrogenase subunit G. | 0.999 |
SDF83422.1 | NuoF | SAMN05192573_101500 | SAMN05192573_12619 | Zinc protease. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.841 |
SDF83422.1 | SDF87301.1 | SAMN05192573_101500 | SAMN05192573_101607 | Zinc protease. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.631 |
SDF83422.1 | SDG30589.1 | SAMN05192573_101500 | SAMN05192573_10339 | Zinc protease. | Cytochrome c. | 0.713 |
SDF83422.1 | SDG40962.1 | SAMN05192573_101500 | SAMN05192573_103326 | Zinc protease. | Cytochrome b6-f complex iron-sulfur subunit. | 0.631 |
SDF83422.1 | SDG57356.1 | SAMN05192573_101500 | SAMN05192573_10414 | Zinc protease. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.751 |
SDF83422.1 | SDG57398.1 | SAMN05192573_101500 | SAMN05192573_10415 | Zinc protease. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.749 |
SDF83422.1 | SDH14169.1 | SAMN05192573_101500 | SAMN05192573_10750 | Zinc protease. | Glycine/D-amino acid oxidase. | 0.644 |
SDF83422.1 | SDH86620.1 | SAMN05192573_101500 | SAMN05192573_11391 | Zinc protease. | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | 0.631 |
SDF83422.1 | SDI63937.1 | SAMN05192573_101500 | SAMN05192573_12618 | Zinc protease. | NADH dehydrogenase subunit E. | 0.820 |
SDF83422.1 | SDI64014.1 | SAMN05192573_101500 | SAMN05192573_12620 | Zinc protease. | NADH dehydrogenase subunit G. | 0.835 |
SDF87301.1 | NuoF | SAMN05192573_101607 | SAMN05192573_12619 | Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. | NADH dehydrogenase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.911 |
page 1 of 5