STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF83767.1DNA-binding transcriptional regulator, AcrR family. (195 aa)    
Predicted Functional Partners:
SDF83825.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.606
SDF83864.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.488
SDH35415.1
Starch-binding associating with outer membrane.
  
     0.485
SDF83903.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
       0.455
SDG10124.1
Starch-binding associating with outer membrane.
  
     0.446
SDH35465.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.425
SDH93895.1
Starch-binding associating with outer membrane.
  
     0.414
SDH93921.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.406
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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