STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF84365.1Calcineurin-like phosphoesterase. (308 aa)    
Predicted Functional Partners:
SDF84284.1
Hypothetical protein.
 
     0.842
SDF84322.1
Hypothetical protein.
 
     0.827
SDF84412.1
Hypothetical protein.
 
     0.797
SDH06941.1
Protein of unknown function.
  
     0.609
SDG32263.1
Uncharacterized membrane protein YphA, DoxX/SURF4 family.
  
     0.560
SDG08830.1
Hypothetical protein.
  
     0.513
SDG85076.1
TM2 domain-containing protein.
 
     0.464
SDF84228.1
Starch-binding associating with outer membrane.
       0.462
SDF84450.1
Hexosaminidase.
  
    0.449
SDF84191.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.434
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.