STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF85463.1alpha-L-rhamnosidase. (788 aa)    
Predicted Functional Partners:
SDF85432.1
Hypothetical protein.
       0.668
SDF86721.1
alpha-L-rhamnosidase.
 
     0.644
SDH93866.1
alpha-L-rhamnosidase.
 
     0.644
SDG01145.1
alpha-L-rhamnosidase.
 
    0.615
SDH88172.1
DUF1680 family protein.
 
   
 0.515
GlgP
Starch phosphorylase.
  
 
 0.503
SDI58464.1
Starch phosphorylase.
  
 
 0.503
SDG19714.1
Predicted dehydrogenase.
  
     0.442
SDI59019.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.