STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF88198.1Conserved hypothetical protein. (168 aa)    
Predicted Functional Partners:
SDF79597.1
Photosynthetic reaction center cytochrome C subunit.
   
 
 0.731
SDH37033.1
Photosynthetic reaction center cytochrome C subunit.
   
 
 0.731
SDF88176.1
Hypothetical protein.
       0.701
SDH14769.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
    0.535
SDF79342.1
DNA topoisomerase-1.
 
    0.476
SDI12202.1
Osmoprotectant transport system permease protein.
  
    0.422
SDF76745.1
Surface antigen.
  
     0.415
SDF88225.1
Putative two-component system response regulator.
       0.411
SDG30589.1
Cytochrome c.
  
 
 0.409
SDH97681.1
Family of unknown function.
  
     0.406
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.