STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF90203.1Type IX secretion system membrane protein, PorP/SprF family. (338 aa)    
Predicted Functional Partners:
SDF90173.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.945
SDI60433.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.754
SDH85838.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.746
SDI19746.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.735
SDI64718.1
Gliding motility-associated lipoprotein GldJ.
 
     0.712
SDG88192.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.706
SDG67387.1
Hypothetical protein.
  
     0.705
GldD
Gliding motility-associated lipoprotein GldD.
  
     0.702
SDG87268.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.691
GldB
Gliding motility-associated lipoprotein GldB.
  
    0.689
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.