STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF90720.1Starch-binding associating with outer membrane. (514 aa)    
Predicted Functional Partners:
SDF90688.1
Iron complex outermembrane recepter protein.
 
     0.956
atpE
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.950
SDF90792.1
Repeat domain-containing protein.
 
 
   0.837
SDF90753.1
Repeat domain-containing protein.
 
 
   0.835
SDH86900.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.632
SDI86441.1
Repeat domain-containing protein.
 
 
   0.620
SDH43152.1
PAP2 superfamily protein.
 
     0.613
SDF90862.1
PAP2 superfamily protein.
 
     0.609
SDH68116.1
Iron complex outermembrane recepter protein.
  
     0.590
SDH43229.1
Hypothetical protein.
 
 
   0.584
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.