Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GltB | SDF67265.1 | SAMN05192573_101187 | SAMN05192573_10193 | Glutamate synthase (NADH) large subunit. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.696 |
| GltB | SDF87264.1 | SAMN05192573_101187 | SAMN05192573_101606 | Glutamate synthase (NADH) large subunit. | Fe-S-cluster-containing dehydrogenase component. | 0.523 |
| GltB | SDG21750.1 | SAMN05192573_101187 | SAMN05192573_102542 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.410 |
| GltB | SDG57148.1 | SAMN05192573_101187 | SAMN05192573_1049 | Glutamate synthase (NADH) large subunit. | Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor. | 0.834 |
| GltB | SDG57308.1 | SAMN05192573_101187 | SAMN05192573_10413 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.410 |
| GltB | tuf | SAMN05192573_101187 | SAMN05192573_104370 | Glutamate synthase (NADH) large subunit. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.410 |
| SDF67223.1 | SDF67265.1 | SAMN05192573_10192 | SAMN05192573_10193 | Hypothetical protein. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.834 |
| SDF67223.1 | fdhD | SAMN05192573_10192 | SAMN05192573_10191 | Hypothetical protein. | FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.804 |
| SDF67265.1 | GltB | SAMN05192573_10193 | SAMN05192573_101187 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Glutamate synthase (NADH) large subunit. | 0.696 |
| SDF67265.1 | SDF67223.1 | SAMN05192573_10193 | SAMN05192573_10192 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.834 |
| SDF67265.1 | SDF87264.1 | SAMN05192573_10193 | SAMN05192573_101606 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Fe-S-cluster-containing dehydrogenase component. | 0.924 |
| SDF67265.1 | SDG21750.1 | SAMN05192573_10193 | SAMN05192573_102542 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.778 |
| SDF67265.1 | SDG30589.1 | SAMN05192573_10193 | SAMN05192573_10339 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c. | 0.926 |
| SDF67265.1 | SDG57148.1 | SAMN05192573_10193 | SAMN05192573_1049 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor. | 0.924 |
| SDF67265.1 | SDG57187.1 | SAMN05192573_10193 | SAMN05192573_10410 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. | 0.944 |
| SDF67265.1 | SDG57308.1 | SAMN05192573_10193 | SAMN05192573_10413 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Hypothetical protein. | 0.778 |
| SDF67265.1 | fdhD | SAMN05192573_10193 | SAMN05192573_10191 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.963 |
| SDF67265.1 | tuf | SAMN05192573_10193 | SAMN05192573_104370 | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.778 |
| SDF87264.1 | GltB | SAMN05192573_101606 | SAMN05192573_101187 | Fe-S-cluster-containing dehydrogenase component. | Glutamate synthase (NADH) large subunit. | 0.523 |
| SDF87264.1 | SDF67265.1 | SAMN05192573_101606 | SAMN05192573_10193 | Fe-S-cluster-containing dehydrogenase component. | Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.924 |
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