STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG08334.1Protein TonB, links inner and outer membranes. (272 aa)    
Predicted Functional Partners:
SDG08498.1
TonB dependent receptor.
 
 
 0.925
SDG08546.1
TolA-binding protein.
 
 
 
 0.894
SDG08380.1
Biopolymer transport protein ExbD.
 
 
 0.854
SDG08422.1
Outer membrane transport energization protein ExbB.
 
 
 0.840
SDG08462.1
Sporulation related domain-containing protein.
 
     0.833
SDH85498.1
Putative porin.
 
 
   0.791
SDI05515.1
Hypothetical protein.
  
   0.773
SDI58536.1
Iron complex outermembrane recepter protein.
  
 
 0.773
SDI67848.1
Family of unknown function.
 
     0.736
SDG71043.1
pRiA4b ORF-3-like protein.
  
     0.733
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.