STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG08380.1Biopolymer transport protein ExbD. (133 aa)    
Predicted Functional Partners:
SDG08422.1
Outer membrane transport energization protein ExbB.
 
 
 0.987
SDG08546.1
TolA-binding protein.
 
 
 0.895
SDG08462.1
Sporulation related domain-containing protein.
 
   
 0.865
SDG08334.1
Protein TonB, links inner and outer membranes.
 
 
 0.854
SDG08498.1
TonB dependent receptor.
 
  
 0.834
SDI63565.1
Outer membrane transport energization protein ExbB.
 
 
 0.783
SDI63669.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.628
SDF68760.1
TonB protein C-terminal.
 
 
 0.604
SDI60626.1
TonB family C-terminal domain-containing protein.
 
 
 0.596
SDI62073.1
TonB family C-terminal domain-containing protein.
 
 
 0.583
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.