STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG10407.1Putative ATP-dependent endonuclease of the OLD family. (575 aa)    
Predicted Functional Partners:
SDG10367.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
 
   
 0.953
SDG04028.1
Hypothetical protein.
  
     0.558
SDH28959.1
Type I restriction-modification system, DNA methylase subunit.
  
  
 0.534
SDG10438.1
Hypothetical protein.
       0.527
SDG10477.1
Hypothetical protein.
       0.520
SDG45676.1
Putative DNA-binding domain-containing protein.
  
    0.517
SDH29024.1
Hypothetical protein.
  
    0.517
SDH76092.1
ATP-dependent DNA helicase RecG.
  
    0.517
SDG43758.1
NAD(P)H-binding.
   
    0.489
SDH04762.1
Hypothetical protein.
   
    0.489
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.