STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG18002.1Hypothetical protein. (493 aa)    
Predicted Functional Partners:
SDG17967.1
SWIM zinc finger.
     0.959
SDG18047.1
AAA domain (dynein-related subfamily).
 
    0.957
SDF69797.1
WD domain-containing protein, G-beta repeat-containing protein.
  
 
 0.949
SDG18083.1
Hypothetical protein.
 
    0.947
SDG17391.1
Protein of unknown function.
    
 0.942
SDH41149.1
Hypothetical protein.
    
 0.942
SDH55780.1
Hypothetical protein.
    
 0.942
SDG18108.1
VWA domain containing CoxE-like protein.
 
     0.938
SerS
seryl-tRNA synthetase.
    
 
 0.837
SDI18236.1
RNA polymerase Rpb6.
   
  0.799
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.