STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG19544.1DNA-binding response regulator, LytR/AlgR family. (247 aa)    
Predicted Functional Partners:
SDG19584.1
Histidine kinase.
 
   0.959
SDG63737.1
DNA-binding response regulator, LytR/AlgR family.
  
  
 
0.911
SDH41825.1
DNA-binding response regulator, LytR/AlgR family.
  
  
 
0.903
SDH41773.1
Histidine kinase.
 
   0.826
SDI11540.1
Histidine kinase.
 
   0.822
SDG03944.1
Histidine kinase.
 
   0.812
SDI57422.1
Histidine kinase.
 
   0.812
SDG63763.1
Histidine kinase.
 
   0.811
SDH34430.1
Histidine kinase.
 
   0.810
SDH37074.1
Histidine kinase.
 
   0.810
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.