STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG19584.1Histidine kinase. (352 aa)    
Predicted Functional Partners:
SDG19544.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.959
SDH41825.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.824
SDG03906.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.814
SDH15739.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.814
SDG14863.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.813
SDG87340.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.813
SDI11582.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.813
SDH34478.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.812
SDH52967.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.812
SDI57493.1
DNA-binding response regulator, LytR/AlgR family.
 
   0.812
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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