STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG03109.1Proline racemase; Belongs to the proline racemase family. (333 aa)    
Predicted Functional Partners:
SDG03070.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
  
 0.961
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.919
SDG03158.1
D-amino-acid dehydrogenase.
 
  
 0.901
SDG03404.1
NADP-dependent aldehyde dehydrogenase.
 
 
 
 0.830
SDI47073.1
TspO and MBR related proteins.
   
    0.683
SDG03029.1
Starch-binding associating with outer membrane.
       0.499
SDG03237.1
AraC-type DNA-binding protein.
 
     0.484
SDG02996.1
TonB-linked outer membrane protein, SusC/RagA family.
       0.451
SDG03287.1
Protein of unknown function.
 
     0.407
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.