STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG03237.1AraC-type DNA-binding protein. (300 aa)    
Predicted Functional Partners:
SDG03287.1
Protein of unknown function.
 
     0.728
SDG03158.1
D-amino-acid dehydrogenase.
 
     0.656
SDH61267.1
Helix-turn-helix domain-containing protein.
  
     0.652
SDI69074.1
AraC-like ligand binding domain-containing protein.
  
   0.621
SDH21326.1
AraC-type DNA-binding protein.
  
     0.594
SDG38817.1
AraC-type DNA-binding protein.
  
     0.591
SDH67538.1
Transcriptional regulator, AraC family.
  
     0.587
SDG03200.1
Hypothetical protein.
       0.584
SDG36642.1
AraC-like ligand binding domain-containing protein.
  
   0.576
SDG03329.1
Amino acid/polyamine/organocation transporter, APC superfamily.
       0.509
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.