STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG03329.1Amino acid/polyamine/organocation transporter, APC superfamily. (477 aa)    
Predicted Functional Partners:
SDG03368.1
Putative Ig domain-containing protein.
       0.689
SDG03287.1
Protein of unknown function.
 
     0.646
SDG03237.1
AraC-type DNA-binding protein.
       0.509
SDG05088.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
   
 0.475
SDG05191.1
Glycosidase.
   
 0.475
SDI14052.1
Oligo-1,6-glucosidase.
   
 0.475
SDI83608.1
Alpha-amylase.
   
 0.475
SDG03404.1
NADP-dependent aldehyde dehydrogenase.
  
  
 0.429
Your Current Organism:
Mucilaginibacter gossypii
NCBI taxonomy Id: 551996
Other names: KCTC 22380, M. gossypii, Mucilaginibacter gossypii Madhaiyan et al. 2010, NCIMB 14470, Pedobacter sp. Gh-67, strain Gh-67
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.